SNP Detail For rs1105228
1.Mapping Information
Human SNP ID rs1105228
Human chromosome chr6
Human SNP position 165292984
Pig chromosome chr1
Pig SNP position 4768100
2.Annotation Information
PubMed ID25742292
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25742292
StudyGenome-wide association study of parity in bangladeshi women.
Disease/TraitNumber of children
Initial sample1,686 Bangladeshi women
Replication sampleNA
Region6q27
Chromosome idchr6
Chromosome position165292984
Reported geneNR
Mapped geneC6orf118
Upstream gene id
Downstream gene id
SNP gene ids168090
Upstream gene distance
Downstream gene distance
SNP risk allelers1105228-?
SNPsrs1105228
Merged0
SNP id current1105228
Contextintron_variant
Intergenic0
Allele frequency
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.29
%95 Ciunit increase
PlatformIllumina [1211988] (imputed)
CNVN
Mapped traitfemale fertility, fertility measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006918, http://www.ebi.ac.uk/efo/EFO_0006923
Study accessionGCST002801
PubMed ID25742292
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25742292
StudyGenome-wide association study of parity in bangladeshi women.
Disease/TraitNumber of pregnancies
Initial sample1,686 Bangladeshi women
Replication sampleNA
Region6q27
Chromosome idchr6
Chromosome position165292984
Reported geneNR
Mapped geneC6orf118
Upstream gene id
Downstream gene id
SNP gene ids168090
Upstream gene distance
Downstream gene distance
SNP risk allelers1105228-?
SNPsrs1105228
Merged0
SNP id current1105228
Contextintron_variant
Intergenic0
Allele frequency
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.28
%95 Ciunit increase
PlatformIllumina [1211988] (imputed)
CNVN
Mapped traitfemale fertility, fertility measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006918, http://www.ebi.ac.uk/efo/EFO_0006923
Study accessionGCST002799