Human SNP ID | rs11047543 |
---|---|
Human chromosome | chr12 |
Human SNP position | 24635405 |
Pig chromosome | chr5 |
Pig SNP position | 52828278 |
PubMed ID | 20062060 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20062060 |
Study | Genome-wide association study of PR interval. |
Disease/Trait | PR interval |
Initial sample | 28,517 European ancestry individuals |
Replication sample | NA |
Region | 12p12.1 |
Chromosome id | chr12 |
Chromosome position | 24635405 |
Reported gene | C12orf67, SOX5 |
Mapped gene | KNOP1P1 - RPL21P102 |
Upstream gene id | 100129937 |
Downstream gene id | 100271432 |
SNP gene ids | |
Upstream gene distance | 50292 |
Downstream gene distance | 7248 |
SNP risk allele | rs11047543-A |
SNPs | rs11047543 |
Merged | 0 |
SNP id current | 11047543 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.15 |
P value | 0.0000000000003 |
Pvalue mlog | 12.5228787452803 |
P value text | |
Or beta | 2.09 |
%95 Ci | [1.53-2.65] ms decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | PR interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004462 |
Study accession | GCST000562 |