SNP Detail For rs11047543
1.Mapping Information
Human SNP ID rs11047543
Human chromosome chr12
Human SNP position 24635405
Pig chromosome chr5
Pig SNP position 52828278
2.Annotation Information
PubMed ID20062060
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20062060
StudyGenome-wide association study of PR interval.
Disease/TraitPR interval
Initial sample28,517 European ancestry individuals
Replication sampleNA
Region12p12.1
Chromosome idchr12
Chromosome position24635405
Reported geneC12orf67, SOX5
Mapped geneKNOP1P1 - RPL21P102
Upstream gene id100129937
Downstream gene id100271432
SNP gene ids
Upstream gene distance50292
Downstream gene distance7248
SNP risk allelers11047543-A
SNPsrs11047543
Merged0
SNP id current11047543
Contextintergenic_variant
Intergenic1
Allele frequency0.15
P value0.0000000000003
Pvalue mlog12.5228787452803
P value text
Or beta2.09
%95 Ci[1.53-2.65] ms decrease
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitPR interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004462
Study accessionGCST000562