SNP Detail For rs11042023
1.Mapping Information
Human SNP ID rs11042023
Human chromosome chr11
Human SNP position 8640969
Pig chromosome chr9
Pig SNP position 928875
2.Annotation Information
PubMed ID23563607
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23563607
StudyGenome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture.
Disease/TraitObesity
Initial sample93,015 European ancestry overweight individuals, 32,858 European ancestry class I obese individuals, 9,889 European ancestry class II obese individuals, 2,896 European ancestry class III obese individuals, up to 65,840 European ancestry controls
Replication sample65,332 European ancestry overweight individuals, 22,373 European ancestry class I obese individuals, 5,476 European ancestry class II obese individuals, 1,162 European ancestry class III obese individuals, up to 39,294 European ancestry controls
Region11p15.4
Chromosome idchr11
Chromosome position8640969
Reported geneRPL27A
Mapped geneTRIM66
Upstream gene id
Downstream gene id
SNP gene ids9866
Upstream gene distance
Downstream gene distance
SNP risk allelers11042023-C
SNPsrs11042023
Merged0
SNP id current11042023
Contextmissense_variant
Intergenic0
Allele frequency0.65
P value0.00000000001
Pvalue mlog11
P value text(Obesity class I)
Or beta1.07
%95 Ci[NR]
PlatformAffymetrix, Illumina [~ 2800000] (imputed)
CNVN
Mapped traitobesity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001073
Study accessionGCST001953