SNP Detail For rs11041816
1.Mapping Information
Human SNP ID rs11041816
Human chromosome chr11
Human SNP position 8222251
Pig chromosome chr9
Pig SNP position 1246494
2.Annotation Information
PubMed ID22581228
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22581228
StudyA genome-wide approach accounting for body mass index identifies genetic variants influencing fasting glycemic traits and insulin resistance.
Disease/TraitFasting glucose-related traits (interaction with BMI)
Initial sampleUp to 58,074 European ancestry individuals
Replication sampleUp tp 38,422 European ancestry individuals
Region11p15.4
Chromosome idchr11
Chromosome position8222251
Reported geneLMO1
Mapped geneLOC101927936 - LMO1
Upstream gene id101927936
Downstream gene id4004
SNP gene ids
Upstream gene distance42004
Downstream gene distance2053
SNP risk allelers11041816-?
SNPsrs11041816
Merged0
SNP id current11041816
Contextdownstream_gene_variant
Intergenic1
Allele frequency
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [~ 2400000] (imputed)
CNVN
Mapped traitbody mass index, fasting blood glucose measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340, http://www.ebi.ac.uk/efo/EFO_0004465
Study accessionGCST001527