SNP Detail For rs11037473
1.Mapping Information
Human SNP ID rs11037473
Human chromosome chr11
Human SNP position 43554517
Pig chromosome chr2
Pig SNP position 20405247
2.Annotation Information
PubMed ID25281659
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25281659
StudyA novel common variant in DCST2 is associated with length in early life and height in adulthood.
Disease/TraitBirth length
Initial sample28,459 European ancestry individuals
Replication sample16,145 European ancestry individuals, 280 Moroccan ancestry individuals, 284 Surinamese ancestry individuals, 319 Turkish ancestry individuals, 651 Chinese ancestry individuals
Region11p11.2
Chromosome idchr11
Chromosome position43554517
Reported geneTTC17, HSD17B12
Mapped geneTTC17 - LOC101928704
Upstream gene id55761
Downstream gene id101928704
SNP gene ids
Upstream gene distance59584
Downstream gene distance2179
SNP risk allelers11037473-A
SNPsrs11037473
Merged0
SNP id current11037473
Contextupstream_gene_variant
Intergenic1
Allele frequency0.07
P value0.000001
Pvalue mlog6
P value text
Or beta0.069
%95 Ci[0.042-0.096] unit decrease
PlatformAffymetrix, Illumina [2201971] (imputed)
CNVN
Mapped traitbody height at birth
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006784
Study accessionGCST002644