Human SNP ID | rs11037473 |
---|---|
Human chromosome | chr11 |
Human SNP position | 43554517 |
Pig chromosome | chr2 |
Pig SNP position | 20405247 |
PubMed ID | 25281659 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25281659 |
Study | A novel common variant in DCST2 is associated with length in early life and height in adulthood. |
Disease/Trait | Birth length |
Initial sample | 28,459 European ancestry individuals |
Replication sample | 16,145 European ancestry individuals, 280 Moroccan ancestry individuals, 284 Surinamese ancestry individuals, 319 Turkish ancestry individuals, 651 Chinese ancestry individuals |
Region | 11p11.2 |
Chromosome id | chr11 |
Chromosome position | 43554517 |
Reported gene | TTC17, HSD17B12 |
Mapped gene | TTC17 - LOC101928704 |
Upstream gene id | 55761 |
Downstream gene id | 101928704 |
SNP gene ids | |
Upstream gene distance | 59584 |
Downstream gene distance | 2179 |
SNP risk allele | rs11037473-A |
SNPs | rs11037473 |
Merged | 0 |
SNP id current | 11037473 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.07 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 0.069 |
%95 Ci | [0.042-0.096] unit decrease |
Platform | Affymetrix, Illumina [2201971] (imputed) |
CNV | N |
Mapped trait | body height at birth |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006784 |
Study accession | GCST002644 |