Human SNP ID | rs11027857 |
---|---|
Human chromosome | chr11 |
Human SNP position | 24382074 |
Pig chromosome | chr2 |
Pig SNP position | 38373609 |
PubMed ID | 25056061 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25056061 |
Study | Biological insights from 108 schizophrenia-associated genetic loci. |
Disease/Trait | Schizophrenia |
Initial sample | 32,405 European ancestry cases, 42,221 European ancestry controls, 1,235 European ancestry cases and 1,235 European ancestry controls from 1235 parent-offspring trios, 1,836 East Asian ancestry cases, 3,383 East Asian ancestry controls |
Replication sample | 1,513 European ancestry cases, 66,236 European ancestry controls |
Region | 11p14.3 |
Chromosome id | chr11 |
Chromosome position | 24382074 |
Reported gene | LUZP2 |
Mapped gene | LOC105376595 - LUZP2 |
Upstream gene id | 105376595 |
Downstream gene id | 338645 |
SNP gene ids | |
Upstream gene distance | 43275 |
Downstream gene distance | 114414 |
SNP risk allele | rs11027857-A |
SNPs | rs11027857 |
Merged | 0 |
SNP id current | 11027857 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.499 |
P value | 0.000000003 |
Pvalue mlog | 8.52287874528033 |
P value text | |
Or beta | 1.064 |
%95 Ci | [1.042-1.085] |
Platform | Affymetrix, Illumina [9005918] (imputed) |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST002539 |