SNP Detail For rs11027857
1.Mapping Information
Human SNP ID rs11027857
Human chromosome chr11
Human SNP position 24382074
Pig chromosome chr2
Pig SNP position 38373609
2.Annotation Information
PubMed ID25056061
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25056061
StudyBiological insights from 108 schizophrenia-associated genetic loci.
Disease/TraitSchizophrenia
Initial sample32,405 European ancestry cases, 42,221 European ancestry controls, 1,235 European ancestry cases and 1,235 European ancestry controls from 1235 parent-offspring trios, 1,836 East Asian ancestry cases, 3,383 East Asian ancestry controls
Replication sample1,513 European ancestry cases, 66,236 European ancestry controls
Region11p14.3
Chromosome idchr11
Chromosome position24382074
Reported geneLUZP2
Mapped geneLOC105376595 - LUZP2
Upstream gene id105376595
Downstream gene id338645
SNP gene ids
Upstream gene distance43275
Downstream gene distance114414
SNP risk allelers11027857-A
SNPsrs11027857
Merged0
SNP id current11027857
Contextintergenic_variant
Intergenic1
Allele frequency0.499
P value0.000000003
Pvalue mlog8.52287874528033
P value text
Or beta1.064
%95 Ci[1.042-1.085]
PlatformAffymetrix, Illumina [9005918] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST002539