SNP Detail For rs11026407
1.Mapping Information
Human SNP ID rs11026407
Human chromosome chr11
Human SNP position 22083484
Pig chromosome chr2
Pig SNP position 40557133
2.Annotation Information
PubMed ID24722205
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24722205
StudyA genome-wide association study on thyroid function and anti-thyroid peroxidase antibodies in Koreans.
Disease/TraitPlasma thyroid-stimulating hormone levels
Initial sample2,789 Korean ancestry individuals
Replication sample829 Korean ancestry individuals
Region11p14.3
Chromosome idchr11
Chromosome position22083484
Reported geneANO5
Mapped geneLOC102723370
Upstream gene id
Downstream gene id
SNP gene ids102723370
Upstream gene distance
Downstream gene distance
SNP risk allelers11026407-C
SNPsrs11026407
Merged0
SNP id current11026407
Contextintergenic_variant
Intergenic0
Allele frequency0.26
P value0.00000002
Pvalue mlog7.69897000433601
P value text
Or beta0.125
%95 Ci[0.074-0.176] uIU/L decrease
PlatformAffymetrix [1418709] (imputed)
CNVN
Mapped traitthyroid stimulating hormone measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004748
Study accessionGCST002417