SNP Detail For rs11024102
1.Mapping Information
Human SNP ID rs11024102
Human chromosome chr11
Human SNP position 16987058
Pig chromosome chr2
Pig SNP position 45164191
2.Annotation Information
PubMed ID22922875
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22922875
StudyGenome-wide association analyses identify three new susceptibility loci for primary angle closure glaucoma.
Disease/TraitGlaucoma (primary angle closure)
Initial sample1,281 East Asian ancestry cases, 1,987 East Asian ancestry controls, 337 South Indian ancestry cases, 2,538 South Indian ancestry controls, 236 South East Asian ancestry cases, 5,083 South East Asian ancestry controls
Replication sample1,545 East Asian ancestry cases, 3,756 East Asian ancestry controls, 165 Saudi Arabian ancestry cases, 175 Saudi Arabian ancestry controls, 127 European ancestry cases, 4,703 European ancestry controls, 80 Indian ancestry cases, 309 Indian ancestry contro
Region11p15.1
Chromosome idchr11
Chromosome position16987058
Reported genePLEKHA7
Mapped genePLEKHA7
Upstream gene id
Downstream gene id
SNP gene ids144100
Upstream gene distance
Downstream gene distance
SNP risk allelers11024102-G
SNPsrs11024102
Merged0
SNP id current11024102
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000000000005
Pvalue mlog11.3010299956639
P value text
Or beta1.22
%95 Ci[NR]
PlatformIllumina [493501]
CNVN
Mapped traitglaucoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000516
Study accessionGCST001649