Human SNP ID | rs11016883 |
---|---|
Human chromosome | chr10 |
Human SNP position | 129702676 |
Pig chromosome | chr14 |
Pig SNP position | 150845651 |
PubMed ID | 23192594 |
---|---|
Journal | Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23192594 |
Study | Gene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women__s Health Initiative SHARe Study. |
Disease/Trait | Waist-to-hip circumference ratio (interaction) |
Initial sample | 8,203 African American females, 3,484 Hispanic females |
Replication sample | NA |
Region | 10q26.3 |
Chromosome id | chr10 |
Chromosome position | 129702676 |
Reported gene | MGMT |
Mapped gene | MGMT |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4255 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs11016883-C |
SNPs | rs11016883 |
Merged | 0 |
SNP id current | 11016883 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.25 |
P value | 0.0000009 |
Pvalue mlog | 6.04575749056067 |
P value text | (AA, Smoking, Ever/Never) |
Or beta | 0.01 |
%95 Ci | [0.01-0.02] unit increase |
Platform | Affymetrix [706791] |
CNV | N |
Mapped trait | waist-hip ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343 |
Study accession | GCST001754 |