SNP Detail For rs11014306
1.Mapping Information
Human SNP ID rs11014306
Human chromosome chr10
Human SNP position 24935533
Pig chromosome chr10
Pig SNP position 55809512
2.Annotation Information
PubMed ID23934736
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/23934736
StudyGenome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study.
Disease/TraitMetabolite levels (Pyroglutamine)
Initial sample1,260 African American individuals
Replication sampleNA
Region10p12.1
Chromosome idchr10
Chromosome position24935533
Reported genePRTFDC1
Mapped genePRTFDC1
Upstream gene id
Downstream gene id
SNP gene ids56952
Upstream gene distance
Downstream gene distance
SNP risk allelers11014306-C
SNPsrs11014306
Merged0
SNP id current11014306
Contextintron_variant
Intergenic0
Allele frequency
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.1
%95 Ci[0.06-0.14] unit decrease
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitpyroglutamine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005408
Study accessionGCST002118