SNP Detail For rs11010290
1.Mapping Information
Human SNP ID rs11010290
Human chromosome chr10
Human SNP position 35771381
Pig chromosome chr10
Pig SNP position 63814968
2.Annotation Information
PubMed ID22808956
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/22808956
StudyGenetically distinct subsets within ANCA-associated vasculitis.
Disease/TraitAntineutrophil cytoplasmic antibody-associated vasculitis
Initial sample914 European ancestry cases, 5,259 European ancestry controls
Replication sample1,454 European ancestry cases, 1,666 European ancestry controls
Region10p11.21
Chromosome idchr10
Chromosome position35771381
Reported geneFZD8
Mapped geneRPL7P37 - LINC01452
Upstream gene id439954
Downstream gene id102578074
SNP gene ids
Upstream gene distance73276
Downstream gene distance6921
SNP risk allelers11010290-?
SNPsrs11010290
Merged0
SNP id current11010290
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta
%95 Ci
PlatformAffymetrix [NR]
CNVN
Mapped traitanti-neutrophil antibody associated vasculitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004826
Study accessionGCST001613