SNP Detail For rs11006923
1.Mapping Information
Human SNP ID rs11006923
Human chromosome chr10
Human SNP position 28216015
Pig chromosome chr10
Pig SNP position 53039894
2.Annotation Information
PubMed ID22005930
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22005930
StudyGenome-wide association study of Alzheimer__s disease with psychotic symptoms.
Disease/TraitPsychosis and Alzheimer__s disease
Initial sample1,039 European ancestry cases with psychosis, 5,659 European ancestry controls, 260 European, African American and Native American ancestry cases with psychosis from 264 families
Replication sampleNA
Region10p12.1
Chromosome idchr10
Chromosome position28216015
Reported geneMPP7
Mapped geneMPP7
Upstream gene id
Downstream gene id
SNP gene ids143098
Upstream gene distance
Downstream gene distance
SNP risk allelers11006923-?
SNPsrs11006923
Merged0
SNP id current11006923
Contextintron_variant
Intergenic0
Allele frequency0.95
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta1.5873016
%95 Ci[NR]
PlatformIllumina [1847262] (imputed)
CNVN
Mapped traitAlzheimers disease, psychotic symptoms
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249, http://www.ebi.ac.uk/efo/EFO_0005940
Study accessionGCST001285