SNP Detail For rs11004008
1.Mapping Information
Human SNP ID rs11004008
Human chromosome chr10
Human SNP position 54025428
Pig chromosome chr14
Pig SNP position 104688301
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region10q21.1
Chromosome idchr10
Chromosome position54025428
Reported geneNR
Mapped genePCDH15
Upstream gene id
Downstream gene id
SNP gene ids65217
Upstream gene distance
Downstream gene distance
SNP risk allelers11004008-G
SNPsrs11004008
Merged
SNP id current11004008
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.0526316
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048