SNP Detail For rs10994607
1.Mapping Information
Human SNP ID rs10994607
Human chromosome chr10
Human SNP position 61000984
Pig chromosome chr14
Pig SNP position 69540674
2.Annotation Information
PubMed ID25710614
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/25710614
StudyGenome-wide association study identifies peanut allergy-specific loci and evidence of epigenetic mediation in US children.
Disease/TraitFood allergy
Initial sample671 European ancestry child cases, 144 European ancestry non-allergic non-sensitized child controls, 234 European ancestry uncertain phenotype child controls, 1,148 European ancestry uncertain phenotype adult controls
Replication sampleNA
Region10q21.2
Chromosome idchr10
Chromosome position61000984
Reported geneRHOBTB1
Mapped geneRHOBTB1
Upstream gene id
Downstream gene id
SNP gene ids9886
Upstream gene distance
Downstream gene distance
SNP risk allelers10994607-?
SNPsrs10994607
Merged0
SNP id current10994607
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta
%95 Ci
PlatformIllumina [6459842] (imputed)
CNVN
Mapped traitfood allergy measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007016
Study accessionGCST002790