Human SNP ID | rs10991437 |
---|---|
Human chromosome | chr9 |
Human SNP position | 104973639 |
Pig chromosome | chr1 |
Pig SNP position | 275917294 |
PubMed ID | 25673412 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 9q31.1 |
Chromosome id | chr9 |
Chromosome position | 104973639 |
Reported gene | ABCA1 |
Mapped gene | LOC105376196 - LOC105376197 |
Upstream gene id | 105376196 |
Downstream gene id | 105376197 |
SNP gene ids | |
Upstream gene distance | 34589 |
Downstream gene distance | 117876 |
SNP risk allele | rs10991437-A |
SNPs | rs10991437 |
Merged | 0 |
SNP id current | 10991437 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.1142 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | (EA, women) |
Or beta | 0.0399 |
%95 Ci | [0.026-0.054] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 9q31.1 |
Chromosome id | chr9 |
Chromosome position | 104973639 |
Reported gene | ABCA1 |
Mapped gene | LOC105376196 - LOC105376197 |
Upstream gene id | 105376196 |
Downstream gene id | 105376197 |
SNP gene ids | |
Upstream gene distance | 34589 |
Downstream gene distance | 117876 |
SNP risk allele | rs10991437-A |
SNPs | rs10991437 |
Merged | 0 |
SNP id current | 10991437 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.1135 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | (EA) |
Or beta | 0.0311 |
%95 Ci | [0.021-0.042] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 9q31.1 |
Chromosome id | chr9 |
Chromosome position | 104973639 |
Reported gene | ABCA1 |
Mapped gene | LOC105376196 - LOC105376197 |
Upstream gene id | 105376196 |
Downstream gene id | 105376197 |
SNP gene ids | |
Upstream gene distance | 34589 |
Downstream gene distance | 117876 |
SNP risk allele | rs10991437-A |
SNPs | rs10991437 |
Merged | 0 |
SNP id current | 10991437 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.1149 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | (women) |
Or beta | 0.0402 |
%95 Ci | [0.026-0.054] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |
PubMed ID | 25673412 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673412 |
Study | New genetic loci link adipose and insulin biology to body fat distribution. |
Disease/Trait | Waist-to-hip ratio adjusted for body mass index |
Initial sample | up to 56,910 European ancestry men, up to 86,570 European ancestry women |
Replication sample | up to 36,570 European ancestry men, 30,172 European ancestry women, 915 Filipino ancestry men, 735 Filipino ancestry women, 2,351 African-American/Afro-Caribbean ancestry men, 6,258 African-American/Afro-Caribbean ancestry women, 2,285 South Asian ancestr |
Region | 9q31.1 |
Chromosome id | chr9 |
Chromosome position | 104973639 |
Reported gene | ABCA1 |
Mapped gene | LOC105376196 - LOC105376197 |
Upstream gene id | 105376196 |
Downstream gene id | 105376197 |
SNP gene ids | |
Upstream gene distance | 34589 |
Downstream gene distance | 117876 |
SNP risk allele | rs10991437-A |
SNPs | rs10991437 |
Merged | 0 |
SNP id current | 10991437 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.1147 |
P value | 0.000000009 |
Pvalue mlog | 8.04575749056067 |
P value text | |
Or beta | 0.0305 |
%95 Ci | [0.02-0.041] unit increase |
Platform | Affymetrix, Illumina, Perlegen [up to 2542447] (imputed) |
CNV | N |
Mapped trait | waist-hip ratio, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002782 |