Human SNP ID | rs10980508 |
---|---|
Human chromosome | chr9 |
Human SNP position | 110657479 |
Pig chromosome | chr1 |
Pig SNP position | 282394252 |
PubMed ID | 23386860 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23386860 |
Study | Exploring genome-wide - dietary heme iron intake interactions and the risk of type 2 diabetes. |
Disease/Trait | Type 2 diabetes (dietary heme iron intake interaction) |
Initial sample | 1,806 European ancestry cases, 2,965 European ancestry controls |
Replication sample | NA |
Region | 9q31.3 |
Chromosome id | chr9 |
Chromosome position | 110657479 |
Reported gene | SVEP1, MUSK |
Mapped gene | LOC105376218 - MUSK |
Upstream gene id | 105376218 |
Downstream gene id | 4593 |
SNP gene ids | |
Upstream gene distance | 36870 |
Downstream gene distance | 11066 |
SNP risk allele | rs10980508-? |
SNPs | rs10980508 |
Merged | 0 |
SNP id current | 10980508 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 0.64 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix [681770] |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST001843 |