Human SNP ID | rs10968749 |
---|---|
Human chromosome | chr9 |
Human SNP position | 28752486 |
Pig chromosome | chr10 |
Pig SNP position | 42297145 |
PubMed ID | 25944848 |
---|---|
Journal | J Psychopharmacol |
Link | www.ncbi.nlm.nih.gov/pubmed/25944848 |
Study | Genome-wide association study identifies common variants associated with pharmacokinetics of psychotropic drugs. |
Disease/Trait | Pharmacokinetics of olanzapine in severe mental disorder (concentration dose ratio) |
Initial sample | Up to 290 European ancestry cases |
Replication sample | NA |
Region | 9p21.1 |
Chromosome id | chr9 |
Chromosome position | 28752486 |
Reported gene | LINGO2 |
Mapped gene | LINGO2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 158038 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10968749-G |
SNPs | rs10968749 |
Merged | |
SNP id current | 10968749 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | 0.8345 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix [686595] |
CNV | N |
Mapped trait | unipolar depression, schizophrenia, bipolar disorder, response to olanzapine, concentration dose ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0000692, http://www.ebi.ac.uk/efo/EFO_0000289, http://purl.obolibrary.org/obo/GO_0097333, http://www.ebi.ac.uk/efo/EFO_0007635 |
Study accession | GCST002885 |