Human SNP ID | rs10956483 |
---|---|
Human chromosome | chr8 |
Human SNP position | 129559864 |
Pig chromosome | chr4 |
Pig SNP position | 11198263 |
PubMed ID | 21738478 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21738478 |
Study | Identification of nine novel loci associated with white blood cell subtypes in a Japanese population. |
Disease/Trait | White blood cell types |
Initial sample | 8,794 Japanese ancestry individuals |
Replication sample | 5,998 Japanese ancestry individuals |
Region | 8q24.21 |
Chromosome id | chr8 |
Chromosome position | 129559864 |
Reported gene | MLZE |
Mapped gene | CCDC26 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 137196 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10956483-C |
SNPs | rs10956483 |
Merged | 0 |
SNP id current | 10956483 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.44 |
P value | 0.0000000002 |
Pvalue mlog | 9.69897000433601 |
P value text | (monocyte count) |
Or beta | 0.071 |
%95 Ci | [0.05-0.09] unit increase |
Platform | Illumina [2178645] (imputed) |
CNV | N |
Mapped trait | monocyte count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005091 |
Study accession | GCST001134 |