SNP Detail For rs10956483
1.Mapping Information
Human SNP ID rs10956483
Human chromosome chr8
Human SNP position 129559864
Pig chromosome chr4
Pig SNP position 11198263
2.Annotation Information
PubMed ID21738478
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21738478
StudyIdentification of nine novel loci associated with white blood cell subtypes in a Japanese population.
Disease/TraitWhite blood cell types
Initial sample8,794 Japanese ancestry individuals
Replication sample5,998 Japanese ancestry individuals
Region8q24.21
Chromosome idchr8
Chromosome position129559864
Reported geneMLZE
Mapped geneCCDC26
Upstream gene id
Downstream gene id
SNP gene ids137196
Upstream gene distance
Downstream gene distance
SNP risk allelers10956483-C
SNPsrs10956483
Merged0
SNP id current10956483
Contextintron_variant
Intergenic0
Allele frequency0.44
P value0.0000000002
Pvalue mlog9.69897000433601
P value text(monocyte count)
Or beta0.071
%95 Ci[0.05-0.09] unit increase
PlatformIllumina [2178645] (imputed)
CNVN
Mapped traitmonocyte count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005091
Study accessionGCST001134