SNP Detail For rs10944479
1.Mapping Information
Human SNP ID rs10944479
Human chromosome chr6
Human SNP position 90170674
Pig chromosome chr1
Pig SNP position 65149695
2.Annotation Information
PubMed ID24586183
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24586183
StudyIdentification of novel genetic Loci associated with thyroid peroxidase antibodies and clinical thyroid disease.
Disease/TraitThyroid peroxidase antibody positivity
Initial sample1,769 European ancestry cases, 16,528 European ancestry controls
Replication sample922 European ancestry cases, 8,068 European ancestry controls
Region6q15
Chromosome idchr6
Chromosome position90170674
Reported geneBACH2
Mapped geneBACH2
Upstream gene id
Downstream gene id
SNP gene ids60468
Upstream gene distance
Downstream gene distance
SNP risk allelers10944479-A
SNPsrs10944479
Merged0
SNP id current10944479
Contextintron_variant
Intergenic0
Allele frequency0.16
P value0.00000004
Pvalue mlog7.39794000867203
P value text
Or beta1.25
%95 Ci[1.14-1.37]
PlatformAffymetrix, Illumina [up to 3437411] (imputed)
CNVN
Mapped traitthyroid peroxidase antibody measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005666
Study accessionGCST002378