Human SNP ID | rs10944479 |
---|---|
Human chromosome | chr6 |
Human SNP position | 90170674 |
Pig chromosome | chr1 |
Pig SNP position | 65149695 |
PubMed ID | 24586183 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24586183 |
Study | Identification of novel genetic Loci associated with thyroid peroxidase antibodies and clinical thyroid disease. |
Disease/Trait | Thyroid peroxidase antibody positivity |
Initial sample | 1,769 European ancestry cases, 16,528 European ancestry controls |
Replication sample | 922 European ancestry cases, 8,068 European ancestry controls |
Region | 6q15 |
Chromosome id | chr6 |
Chromosome position | 90170674 |
Reported gene | BACH2 |
Mapped gene | BACH2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 60468 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10944479-A |
SNPs | rs10944479 |
Merged | 0 |
SNP id current | 10944479 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.16 |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | |
Or beta | 1.25 |
%95 Ci | [1.14-1.37] |
Platform | Affymetrix, Illumina [up to 3437411] (imputed) |
CNV | N |
Mapped trait | thyroid peroxidase antibody measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005666 |
Study accession | GCST002378 |