Human SNP ID | rs10938494 |
---|---|
Human chromosome | chr4 |
Human SNP position | 47561431 |
Pig chromosome | chr8 |
Pig SNP position | 39415850 |
PubMed ID | 19798445 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19798445 |
Study | Genetic determinants of circulating sphingolipid concentrations in European populations. |
Disease/Trait | Sphingolipid levels |
Initial sample | 4,110 European ancestry individuals |
Replication sample | NA |
Region | 4p12 |
Chromosome id | chr4 |
Chromosome position | 47561431 |
Reported gene | ATP10D |
Mapped gene | ATP10D |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 57205 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10938494-A |
SNPs | rs10938494 |
Merged | 0 |
SNP id current | 10938494 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.23 |
P value | 8E-19 |
Pvalue mlog | 18.096910013008 |
P value text | (GluCer) |
Or beta | 0.06 |
%95 Ci | [0.04-0.07] unit increase |
Platform | Illumina [318237] |
CNV | N |
Mapped trait | sphingolipid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004622 |
Study accession | GCST000493 |