SNP Detail For rs10937470
1.Mapping Information
Human SNP ID rs10937470
Human chromosome chr3
Human SNP position 191283019
Pig chromosome chr13
Pig SNP position 137989708
2.Annotation Information
PubMed ID21116278
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/21116278
StudyGenome-wide association with MRI atrophy measures as a quantitative trait locus for Alzheimer__s disease.
Disease/TraitTotal ventricular volume (Alzheimer__s disease interaction)
Initial sample424 European ancestry mild cognitive impairment cases, 236 European ancestry Alzheimer__s disease cases, 279 European ancestry controls
Replication sampleNA
Region3q28
Chromosome idchr3
Chromosome position191283019
Reported geneUTS2D
Mapped geneUTS2B
Upstream gene id
Downstream gene id
SNP gene ids257313
Upstream gene distance
Downstream gene distance
SNP risk allelers10937470-?
SNPsrs10937470
Merged0
SNP id current10937470
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.004
%95 Ci[NR] unit decrease
PlatformIllumina [478011]
CNVN
Mapped traitAlzheimers disease, brain volume measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249, http://www.ebi.ac.uk/efo/EFO_0006930
Study accessionGCST000892