SNP Detail For rs10934011
1.Mapping Information
Human SNP ID rs10934011
Human chromosome chr3
Human SNP position 110070723
Pig chromosome chr13
Pig SNP position 157776657
2.Annotation Information
PubMed ID23725790
JournalTwin Res Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23725790
StudyGWAS of DNA methylation variation within imprinting control regions suggests parent-of-origin association.
Disease/TraitDNA methylation (parent-of-origin)
Initial sample1,024 European ancestry individuals
Replication sampleNA
Region3q13.13
Chromosome idchr3
Chromosome position110070723
Reported geneintergenic
Mapped geneLOC105374035 - LOC105374036
Upstream gene id105374035
Downstream gene id105374036
SNP gene ids
Upstream gene distance234566
Downstream gene distance376512
SNP risk allelers10934011-G
SNPsrs10934011
Merged0
SNP id current10934011
Contextregulatory_region_variant
Intergenic1
Allele frequency0.21
P value0.000000001
Pvalue mlog9
P value text(NESPAS CpG08_09)
Or beta
%95 Ci
PlatformIllumina [515966]
CNVN
Mapped traitDNA methylation
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0006306
Study accessionGCST002057