Human SNP ID | rs10930597 |
---|---|
Human chromosome | chr2 |
Human SNP position | 173462117 |
Pig chromosome | chr15 |
Pig SNP position | 88858405 |
PubMed ID | 24165912 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24165912 |
Study | Genome-wide association study identifies 8 novel loci associated with blood pressure responses to interventions in Han Chinese. |
Disease/Trait | Blood pressure measurement (high sodium and potassium intervention) |
Initial sample | 1,836 Han Chinese ancestry individuals |
Replication sample | 654 Han Chinese ancestry individuals |
Region | 2q31.1 |
Chromosome id | chr2 |
Chromosome position | 173462117 |
Reported gene | CDCA7 |
Mapped gene | LOC105373744 - LOC643997 |
Upstream gene id | 105373744 |
Downstream gene id | 643997 |
SNP gene ids | |
Upstream gene distance | 15338 |
Downstream gene distance | 23542 |
SNP risk allele | rs10930597-T |
SNPs | rs10930597 |
Merged | 0 |
SNP id current | 10930597 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.05 |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | (DBP, during intervention) |
Or beta | 3.2 |
%95 Ci | [2.06-4.34] mmHg decrease |
Platform | Affymetrix [2216774] (imputed) |
CNV | N |
Mapped trait | diastolic blood pressure, response to high sodium diet, response to dietary potassium supplementation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006336, http://www.ebi.ac.uk/efo/EFO_0005401, http://www.ebi.ac.uk/efo/EFO_0005403 |
Study accession | GCST002252 |
PubMed ID | 24165912 |
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24165912 |
Study | Genome-wide association study identifies 8 novel loci associated with blood pressure responses to interventions in Han Chinese. |
Disease/Trait | Blood pressure measurement (high sodium and potassium intervention) |
Initial sample | 1,836 Han Chinese ancestry individuals |
Replication sample | 654 Han Chinese ancestry individuals |
Region | 2q31.1 |
Chromosome id | chr2 |
Chromosome position | 173462117 |
Reported gene | CDCA7 |
Mapped gene | LOC105373744 - LOC643997 |
Upstream gene id | 105373744 |
Downstream gene id | 643997 |
SNP gene ids | |
Upstream gene distance | 15338 |
Downstream gene distance | 23542 |
SNP risk allele | rs10930597-T |
SNPs | rs10930597 |
Merged | 0 |
SNP id current | 10930597 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.05 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | (MAP, during intervention) |
Or beta | 3.48 |
%95 Ci | [2.28-4.68] mmHg decrease |
Platform | Affymetrix [2216774] (imputed) |
CNV | N |
Mapped trait | mean arterial pressure, response to high sodium diet, response to dietary potassium supplementation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006340, http://www.ebi.ac.uk/efo/EFO_0005401, http://www.ebi.ac.uk/efo/EFO_0005403 |
Study accession | GCST002252 |
PubMed ID | 24165912 |
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24165912 |
Study | Genome-wide association study identifies 8 novel loci associated with blood pressure responses to interventions in Han Chinese. |
Disease/Trait | Blood pressure measurement (high sodium and potassium intervention) |
Initial sample | 1,836 Han Chinese ancestry individuals |
Replication sample | 654 Han Chinese ancestry individuals |
Region | 2q31.1 |
Chromosome id | chr2 |
Chromosome position | 173462117 |
Reported gene | CDCA7 |
Mapped gene | LOC105373744 - LOC643997 |
Upstream gene id | 105373744 |
Downstream gene id | 643997 |
SNP gene ids | |
Upstream gene distance | 15338 |
Downstream gene distance | 23542 |
SNP risk allele | rs10930597-T |
SNPs | rs10930597 |
Merged | 0 |
SNP id current | 10930597 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.05 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (SBP, during intervention) |
Or beta | 3.99 |
%95 Ci | [2.27-5.71] mmHg decrease |
Platform | Affymetrix [2216774] (imputed) |
CNV | N |
Mapped trait | systolic blood pressure, response to high sodium diet, response to dietary potassium supplementation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006335, http://www.ebi.ac.uk/efo/EFO_0005401, http://www.ebi.ac.uk/efo/EFO_0005403 |
Study accession | GCST002252 |
PubMed ID | 24165912 |
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24165912 |
Study | Genome-wide association study identifies 8 novel loci associated with blood pressure responses to interventions in Han Chinese. |
Disease/Trait | Blood pressure measurement (low sodium intervention) |
Initial sample | 1,850 Han Chinese ancestry individuals |
Replication sample | 660 Han Chinese ancestry individuals |
Region | 2q31.1 |
Chromosome id | chr2 |
Chromosome position | 173462117 |
Reported gene | CDCA7 |
Mapped gene | LOC105373744 - LOC643997 |
Upstream gene id | 105373744 |
Downstream gene id | 643997 |
SNP gene ids | |
Upstream gene distance | 15338 |
Downstream gene distance | 23542 |
SNP risk allele | rs10930597-T |
SNPs | rs10930597 |
Merged | 0 |
SNP id current | 10930597 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.05 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (DBP, during intervention) |
Or beta | 3.11 |
%95 Ci | [1.89-4.33] mmHg decrease |
Platform | Affymetrix [2216774] (imputed) |
CNV | N |
Mapped trait | diastolic blood pressure, response to low sodium diet |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006336, http://www.ebi.ac.uk/efo/EFO_0005402 |
Study accession | GCST002250 |
PubMed ID | 24165912 |
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24165912 |
Study | Genome-wide association study identifies 8 novel loci associated with blood pressure responses to interventions in Han Chinese. |
Disease/Trait | Blood pressure measurement (low sodium intervention) |
Initial sample | 1,850 Han Chinese ancestry individuals |
Replication sample | 660 Han Chinese ancestry individuals |
Region | 2q31.1 |
Chromosome id | chr2 |
Chromosome position | 173462117 |
Reported gene | CDCA7 |
Mapped gene | LOC105373744 - LOC643997 |
Upstream gene id | 105373744 |
Downstream gene id | 643997 |
SNP gene ids | |
Upstream gene distance | 15338 |
Downstream gene distance | 23542 |
SNP risk allele | rs10930597-T |
SNPs | rs10930597 |
Merged | 0 |
SNP id current | 10930597 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.05 |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | (MAP, during intervention) |
Or beta | 3.37 |
%95 Ci | [2.17-4.57] mmHg decrease |
Platform | Affymetrix [2216774] (imputed) |
CNV | N |
Mapped trait | mean arterial pressure, response to low sodium diet |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006340, http://www.ebi.ac.uk/efo/EFO_0005402 |
Study accession | GCST002250 |
PubMed ID | 24165912 |
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24165912 |
Study | Genome-wide association study identifies 8 novel loci associated with blood pressure responses to interventions in Han Chinese. |
Disease/Trait | Blood pressure measurement (low sodium intervention) |
Initial sample | 1,850 Han Chinese ancestry individuals |
Replication sample | 660 Han Chinese ancestry individuals |
Region | 2q31.1 |
Chromosome id | chr2 |
Chromosome position | 173462117 |
Reported gene | CDCA7 |
Mapped gene | LOC105373744 - LOC643997 |
Upstream gene id | 105373744 |
Downstream gene id | 643997 |
SNP gene ids | |
Upstream gene distance | 15338 |
Downstream gene distance | 23542 |
SNP risk allele | rs10930597-T |
SNPs | rs10930597 |
Merged | 0 |
SNP id current | 10930597 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.05 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (SBP, during intervention) |
Or beta | 3.72 |
%95 Ci | [2.09-5.35] mmHg decrease |
Platform | Affymetrix [2216774] (imputed) |
CNV | N |
Mapped trait | systolic blood pressure, response to low sodium diet |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006335, http://www.ebi.ac.uk/efo/EFO_0005402 |
Study accession | GCST002250 |