Human SNP ID | rs10923038 |
---|---|
Human chromosome | chr1 |
Human SNP position | 88186088 |
Pig chromosome | chr4 |
Pig SNP position | 140336511 |
PubMed ID | 23999434 |
---|---|
Journal | J Clin Invest |
Link | www.ncbi.nlm.nih.gov/pubmed/23999434 |
Study | Common genetic variation at the IL1RL1 locus regulates IL-33/ST2 signaling. |
Disease/Trait | Serum protein levels (sST2) |
Initial sample | 2,797 individuals |
Replication sample | NA |
Region | 1p22.2 |
Chromosome id | chr1 |
Chromosome position | 88186088 |
Reported gene | PKN2 |
Mapped gene | LOC105378837 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105378837 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10923038-C |
SNPs | rs10923038 |
Merged | 0 |
SNP id current | 10923038 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.34 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [2500000] (imputed) |
CNV | N |
Mapped trait | serum ST2 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005416 |
Study accession | GCST002166 |