SNP Detail For rs10923038
1.Mapping Information
Human SNP ID rs10923038
Human chromosome chr1
Human SNP position 88186088
Pig chromosome chr4
Pig SNP position 140336511
2.Annotation Information
PubMed ID23999434
JournalJ Clin Invest
Linkwww.ncbi.nlm.nih.gov/pubmed/23999434
StudyCommon genetic variation at the IL1RL1 locus regulates IL-33/ST2 signaling.
Disease/TraitSerum protein levels (sST2)
Initial sample2,797 individuals
Replication sampleNA
Region1p22.2
Chromosome idchr1
Chromosome position88186088
Reported genePKN2
Mapped geneLOC105378837
Upstream gene id
Downstream gene id
SNP gene ids105378837
Upstream gene distance
Downstream gene distance
SNP risk allelers10923038-C
SNPsrs10923038
Merged0
SNP id current10923038
Contextintergenic_variant
Intergenic0
Allele frequency0.34
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta
%95 Ci
PlatformAffymetrix [2500000] (imputed)
CNVN
Mapped traitserum ST2 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005416
Study accessionGCST002166