SNP Detail For rs10922449
1.Mapping Information
Human SNP ID rs10922449
Human chromosome chr1
Human SNP position 198554967
Pig chromosome chr10
Pig SNP position 26088796
2.Annotation Information
PubMed ID26718567
JournalNeurology
Linkwww.ncbi.nlm.nih.gov/pubmed/26718567
StudyShared genetic susceptibility of vascular-related biomarkers with ischemic and recurrent stroke.
Disease/TraitThrombin-antithrombin complex levels in ischemic stroke
Initial sampleup to 1,725 European ancestry cases, up to 258 African ancestry cases, up to 117 cases
Replication sampleNA
Region1q31.3
Chromosome idchr1
Chromosome position198554967
Reported geneNR
Mapped geneATP6V1G3 - PTPRC
Upstream gene id127124
Downstream gene id5788
SNP gene ids
Upstream gene distance14022
Downstream gene distance84001
SNP risk allelers10922449-?
SNPsrs10922449
Merged
SNP id current10922449
Contextregulatory_region_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformIllumina [7500450] (imputed)
CNVN
Mapped traitIschemic stroke
Mapped trait URIhttp://purl.obolibrary.org/obo/HP_0002140
Study accessionGCST003233