Human SNP ID | rs10918270 |
---|---|
Human chromosome | chr1 |
Human SNP position | 161945711 |
Pig chromosome | chr4 |
Pig SNP position | 96632521 |
PubMed ID | 19772629 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19772629 |
Study | Genomewide association study for onset age in Parkinson disease. |
Disease/Trait | Parkinson__s disease (age of onset) |
Initial sample | 857 European ancestry familial cases, 440 idiopathic cases |
Replication sample | 747 European ancestry idiopathic cases |
Region | 1q23.3 |
Chromosome id | chr1 |
Chromosome position | 161945711 |
Reported gene | ATF6 |
Mapped gene | ATF6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 22926 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10918270-A |
SNPs | rs10918270 |
Merged | 0 |
SNP id current | 10918270 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 2.26 |
%95 Ci | [NR] years decrease |
Platform | Illumina, Perlegen [1861750] (imputed) |
CNV | N |
Mapped trait | Parkinson__s disease, age at onset |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002508, http://www.ebi.ac.uk/efo/EFO_0004847 |
Study accession | GCST000490 |