SNP Detail For rs10918270
1.Mapping Information
Human SNP ID rs10918270
Human chromosome chr1
Human SNP position 161945711
Pig chromosome chr4
Pig SNP position 96632521
2.Annotation Information
PubMed ID19772629
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19772629
StudyGenomewide association study for onset age in Parkinson disease.
Disease/TraitParkinson__s disease (age of onset)
Initial sample857 European ancestry familial cases, 440 idiopathic cases
Replication sample747 European ancestry idiopathic cases
Region1q23.3
Chromosome idchr1
Chromosome position161945711
Reported geneATF6
Mapped geneATF6
Upstream gene id
Downstream gene id
SNP gene ids22926
Upstream gene distance
Downstream gene distance
SNP risk allelers10918270-A
SNPsrs10918270
Merged0
SNP id current10918270
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta2.26
%95 Ci[NR] years decrease
PlatformIllumina, Perlegen [1861750] (imputed)
CNVN
Mapped traitParkinson__s disease, age at onset
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508, http://www.ebi.ac.uk/efo/EFO_0004847
Study accessionGCST000490