Human SNP ID | rs10906982 |
---|---|
Human chromosome | chr15 |
Human SNP position | 83899406 |
Pig chromosome | chr7 |
Pig SNP position | 56634689 |
PubMed ID | 20397748 |
---|---|
Journal | Twin Res Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20397748 |
Study | Genome-wide association study of height and body mass index in Australian twin families. |
Disease/Trait | Height |
Initial sample | 11,536 European ancestry individuals |
Replication sample | NA |
Region | 15q25.2 |
Chromosome id | chr15 |
Chromosome position | 83899406 |
Reported gene | SH3GL3, ADAMTSL3 |
Mapped gene | ADAMTSL3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 57188 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10906982-A |
SNPs | rs10906982 |
Merged | 0 |
SNP id current | 10906982 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.52 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | |
Or beta | 0.07 |
%95 Ci | [0.03-0.11] SD increase |
Platform | Illumina [559712] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000644 |
PubMed ID | 18391952 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18391952 |
Study | Genome-wide association analysis identifies 20 loci that influence adult height. |
Disease/Trait | Height |
Initial sample | 13,665 European ancestry individuals |
Replication sample | 16,482 European ancestry individuals |
Region | 15q25.2 |
Chromosome id | chr15 |
Chromosome position | 83899406 |
Reported gene | ADAMTSL3 |
Mapped gene | ADAMTSL3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 57188 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10906982-A |
SNPs | rs10906982 |
Merged | 0 |
SNP id current | 10906982 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.52 |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | |
Or beta | 0.05 |
%95 Ci | [0.02-0.07] s.d. increase (males) |
Platform | Affymetrix [402951] |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000174 |