Human SNP ID | rs10906115 |
---|---|
Human chromosome | chr10 |
Human SNP position | 12272998 |
Pig chromosome | chr10 |
Pig SNP position | 65477981 |
PubMed ID | 20862305 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20862305 |
Study | Identification of new genetic risk variants for type 2 diabetes. |
Disease/Trait | Type 2 diabetes |
Initial sample | 1,019 Chinese ancestry cases, 1,710 Chinese ancestry controls |
Replication sample | 2,591 European ancestry cases, 3,052 European ancestry controls, 6,184 East Asian cases, 9,853 East Asian controls |
Region | 10p13 |
Chromosome id | chr10 |
Chromosome position | 12272998 |
Reported gene | CDC123, CAMK1D |
Mapped gene | CDC123 - CAMK1D |
Upstream gene id | 8872 |
Downstream gene id | 57118 |
SNP gene ids | |
Upstream gene distance | 22408 |
Downstream gene distance | 76519 |
SNP risk allele | rs10906115-A |
SNPs | rs10906115 |
Merged | 0 |
SNP id current | 10906115 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.57 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | 1.13 |
%95 Ci | [1.08-1.18] |
Platform | Affymetrix [590887] |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST000796 |