SNP Detail For rs10897518
1.Mapping Information
Human SNP ID rs10897518
Human chromosome chr11
Human SNP position 64593233
Pig chromosome chr2
Pig SNP position 6694419
2.Annotation Information
PubMed ID25811787
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25811787
StudyModulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans.
Disease/TraitUrate levels in overweight individuals
Initial sampleup to 10,058 European ancestry male individuals, up to 7,189 European ancestry female individuals
Replication sampleNA
Region11q13.1
Chromosome idchr11
Chromosome position64593233
Reported geneSLC22A12, NRXN2
Mapped geneSLC22A12
Upstream gene id
Downstream gene id
SNP gene ids116085
Upstream gene distance
Downstream gene distance
SNP risk allelers10897518-C
SNPsrs10897518
Merged0
SNP id current10897518
Contextintron_variant
Intergenic0
Allele frequency0.32
P value0.00000000000009
Pvalue mlog13.0457574905606
P value text
Or beta0.089
%95 Ci[0.065-0.113] kg/m2 increase
PlatformAffymetrix, Illumina [at least 188473] (imputed)
CNVN
Mapped traiturate measurement, overweight body mass index status
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0005935
Study accessionGCST002829
PubMed ID25811787
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25811787
StudyModulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans.
Disease/TraitUrate levels in lean individuals
Initial sampleup to 5,529 European ancestry male individuals, up to 9,753 European ancestry female individuals
Replication sampleNA
Region11q13.1
Chromosome idchr11
Chromosome position64593233
Reported geneSLC22A12, NRXN2
Mapped geneSLC22A12
Upstream gene id
Downstream gene id
SNP gene ids116085
Upstream gene distance
Downstream gene distance
SNP risk allelers10897518-C
SNPsrs10897518
Merged0
SNP id current10897518
Contextintron_variant
Intergenic0
Allele frequency0.32
P value0.000001
Pvalue mlog6
P value text
Or beta0.06
%95 Ci[0.036-0.084] kg/m2 increase
PlatformAffymetrix, Illumina [at least 188473] (imputed)
CNVN
Mapped traiturate measurement, underweight body mass index status
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531, http://www.ebi.ac.uk/efo/EFO_0005936
Study accessionGCST002830