Human SNP ID | rs10897449 |
---|---|
Human chromosome | chr11 |
Human SNP position | 63825149 |
Pig chromosome | chr2 |
Pig SNP position | 7466830 |
PubMed ID | 22554406 |
---|---|
Journal | Genes Brain Behav |
Link | www.ncbi.nlm.nih.gov/pubmed/22554406 |
Study | Family-based genome-wide association study of frontal θ oscillations identifies potassium channel gene KCNJ6. |
Disease/Trait | Electroencephalographic traits in alcoholism |
Initial sample | 1,560 European ancestry individuals from 117 families |
Replication sample | NA |
Region | 11q13.1 |
Chromosome id | chr11 |
Chromosome position | 63825149 |
Reported gene | C11orf84 |
Mapped gene | C11orf84 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 144097 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10897449-T |
SNPs | rs10897449 |
Merged | 0 |
SNP id current | 10897449 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.453 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 0.099 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [634583] |
CNV | N |
Mapped trait | frontal theta oscillation measurement, alcohol dependence |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004800, http://www.ebi.ac.uk/efo/EFO_0003829 |
Study accession | GCST001503 |