SNP Detail For rs10897449
1.Mapping Information
Human SNP ID rs10897449
Human chromosome chr11
Human SNP position 63825149
Pig chromosome chr2
Pig SNP position 7466830
2.Annotation Information
PubMed ID22554406
JournalGenes Brain Behav
Linkwww.ncbi.nlm.nih.gov/pubmed/22554406
StudyFamily-based genome-wide association study of frontal θ oscillations identifies potassium channel gene KCNJ6.
Disease/TraitElectroencephalographic traits in alcoholism
Initial sample1,560 European ancestry individuals from 117 families
Replication sampleNA
Region11q13.1
Chromosome idchr11
Chromosome position63825149
Reported geneC11orf84
Mapped geneC11orf84
Upstream gene id
Downstream gene id
SNP gene ids144097
Upstream gene distance
Downstream gene distance
SNP risk allelers10897449-T
SNPsrs10897449
Merged0
SNP id current10897449
Contextintron_variant
Intergenic0
Allele frequency0.453
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta0.099
%95 Ci[NR] unit decrease
PlatformIllumina [634583]
CNVN
Mapped traitfrontal theta oscillation measurement, alcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004800, http://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST001503