Human SNP ID | rs10895140 |
---|---|
Human chromosome | chr11 |
Human SNP position | 101565990 |
Pig chromosome | chr9 |
Pig SNP position | 36351832 |
PubMed ID | 25231870 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25231870 |
Study | Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche. |
Disease/Trait | Menarche (age at onset) |
Initial sample | Up to 182,413 European ancestry females |
Replication sample | NA |
Region | 11q22.1 |
Chromosome id | chr11 |
Chromosome position | 101565990 |
Reported gene | TRPC6, PGR |
Mapped gene | TRPC6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7225 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10895140-G |
SNPs | rs10895140 |
Merged | 0 |
SNP id current | 10895140 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.66 |
P value | 0.00000000000007 |
Pvalue mlog | 13.1549019599857 |
P value text | |
Or beta | 0.04 |
%95 Ci | [0.03-0.05] unit increase |
Platform | Affymetrix, Illumina [2441815] (imputed) |
CNV | N |
Mapped trait | age at menarche |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004703 |
Study accession | GCST002541 |