SNP Detail For rs10895140
1.Mapping Information
Human SNP ID rs10895140
Human chromosome chr11
Human SNP position 101565990
Pig chromosome chr9
Pig SNP position 36351832
2.Annotation Information
PubMed ID25231870
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25231870
StudyParent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
Disease/TraitMenarche (age at onset)
Initial sampleUp to 182,413 European ancestry females
Replication sampleNA
Region11q22.1
Chromosome idchr11
Chromosome position101565990
Reported geneTRPC6, PGR
Mapped geneTRPC6
Upstream gene id
Downstream gene id
SNP gene ids7225
Upstream gene distance
Downstream gene distance
SNP risk allelers10895140-G
SNPsrs10895140
Merged0
SNP id current10895140
Contextintron_variant
Intergenic0
Allele frequency0.66
P value0.00000000000007
Pvalue mlog13.1549019599857
P value text
Or beta0.04
%95 Ci[0.03-0.05] unit increase
PlatformAffymetrix, Illumina [2441815] (imputed)
CNVN
Mapped traitage at menarche
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004703
Study accessionGCST002541