SNP Detail For rs10894804
1.Mapping Information
Human SNP ID rs10894804
Human chromosome chr11
Human SNP position 134377948
Pig chromosome chr9
Pig SNP position 67615471
2.Annotation Information
PubMed ID25648963
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25648963
StudyGenome-wide Studies of Verbal Declarative Memory in Nondemented Older People: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium.
Disease/TraitVerbal declarative memory
Initial sampleUp to 27,337 European ancestry individuals, up to 472 Korkulan individuals, up to 1,267 Erasmus Rucphen Family individuals
Replication sampleUp to 10,617 European ancestry individuals, up to 3,811 African American individuals
Region11q25
Chromosome idchr11
Chromosome position134377948
Reported geneB3GAT1, LOC89944
Mapped geneGLB1L2 - B3GAT1
Upstream gene id89944
Downstream gene id27087
SNP gene ids
Upstream gene distance1620
Downstream gene distance556
SNP risk allelers10894804-A
SNPsrs10894804
Merged0
SNP id current10894804
Contextintron_variant
Intergenic1
Allele frequency0.53
P value0.000005
Pvalue mlog5.30102999566398
P value text(CERAD-dr)
Or beta0.2826
%95 Ci[0.16-0.4] unit decrease
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitword list delayed recall measurement, memory performance
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006805, http://www.ebi.ac.uk/efo/EFO_0004874
Study accessionGCST002701