SNP Detail For rs10894604
1.Mapping Information
Human SNP ID rs10894604
Human chromosome chr11
Human SNP position 132771851
Pig chromosome chr9
Pig SNP position 65872676
2.Annotation Information
PubMed ID23966867
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23966867
StudyGenome-wide association of body fat distribution in African ancestry populations suggests new loci.
Disease/TraitWaist-hip ratio
Initial sampleup to 19,744 African American individuals
Replication sampleUp to 7,606 African American individuals
Region11q25
Chromosome idchr11
Chromosome position132771851
Reported geneOPCML
Mapped geneOPCML
Upstream gene id
Downstream gene id
SNP gene ids4978
Upstream gene distance
Downstream gene distance
SNP risk allelers10894604-T
SNPsrs10894604
Merged0
SNP id current10894604
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.83
P value0.0000004
Pvalue mlog6.39794000867203
P value text(BMI_pooled)
Or beta0.06
%95 Ci[0.04-0.08] unit decrease
PlatformAffymetrix, Illumina [3200000] (imputed)
CNVN
Mapped traitwaist-hip ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004343
Study accessionGCST002138