SNP Detail For rs10892761
1.Mapping Information
Human SNP ID rs10892761
Human chromosome chr11
Human SNP position 121627175
Pig chromosome chr9
Pig SNP position 53832662
2.Annotation Information
PubMed ID25599974
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/25599974
StudyA Genome-Wide Association Study of Early Spontaneous Preterm Delivery.
Disease/TraitSpontaneous preterm birth (preterm birth)
Initial sample916 pre-term birth neonates, 935 term birth neonates
Replication sample243 pre-term birth neonates, 149 term birth neonates
Region11q24.1
Chromosome idchr11
Chromosome position121627175
Reported geneSORL1
Mapped geneSORL1
Upstream gene id
Downstream gene id
SNP gene ids6653
Upstream gene distance
Downstream gene distance
SNP risk allelers10892761-?
SNPsrs10892761
Merged0
SNP id current10892761
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.64
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.37
%95 Ci[NR]
PlatformAffymetrix [797196]
CNVN
Mapped traitbirth measurement, spontaneous preterm birth
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006921, http://www.ebi.ac.uk/efo/EFO_0006917
Study accessionGCST002751