SNP Detail For rs10888073
1.Mapping Information
Human SNP ID rs10888073
Human chromosome chr8
Human SNP position 13881272
Pig chromosome chr17
Pig SNP position 1635726
2.Annotation Information
PubMed ID25886283
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25886283
StudyGenome-wide association study of serum minerals levels in children of different ethnic background.
Disease/TraitMagnesium levels
Initial sample2,317 European ancestry children, 1,283 African-American ancestry children
Replication sampleNA
Region8p22
Chromosome idchr8
Chromosome position13881272
Reported geneNR
Mapped geneLOC105379292 - LOC105379293
Upstream gene id105379292
Downstream gene id105379293
SNP gene ids
Upstream gene distance32172
Downstream gene distance105212
SNP risk allelers10888073-T
SNPsrs10888073
Merged0
SNP id current10888073
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(AA)
Or beta0.0365
%95 Ci(0.02089-0.0521) mg/dl increase
PlatformIllumina [up to 509150]
CNVN
Mapped traitmagnesium measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004845
Study accessionGCST002860