Human SNP ID | rs10888073 |
---|---|
Human chromosome | chr8 |
Human SNP position | 13881272 |
Pig chromosome | chr17 |
Pig SNP position | 1635726 |
PubMed ID | 25886283 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25886283 |
Study | Genome-wide association study of serum minerals levels in children of different ethnic background. |
Disease/Trait | Magnesium levels |
Initial sample | 2,317 European ancestry children, 1,283 African-American ancestry children |
Replication sample | NA |
Region | 8p22 |
Chromosome id | chr8 |
Chromosome position | 13881272 |
Reported gene | NR |
Mapped gene | LOC105379292 - LOC105379293 |
Upstream gene id | 105379292 |
Downstream gene id | 105379293 |
SNP gene ids | |
Upstream gene distance | 32172 |
Downstream gene distance | 105212 |
SNP risk allele | rs10888073-T |
SNPs | rs10888073 |
Merged | 0 |
SNP id current | 10888073 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (AA) |
Or beta | 0.0365 |
%95 Ci | (0.02089-0.0521) mg/dl increase |
Platform | Illumina [up to 509150] |
CNV | N |
Mapped trait | magnesium measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004845 |
Study accession | GCST002860 |