SNP Detail For rs10886471
1.Mapping Information
Human SNP ID rs10886471
Human chromosome chr10
Human SNP position 119389891
Pig chromosome chr14
Pig SNP position 140815773
2.Annotation Information
PubMed ID22961080
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/22961080
StudyA genome-wide association study identifies GRK5 and RASGRP1 as type 2 diabetes loci in Chinese Hans.
Disease/TraitType 2 diabetes
Initial sample1,839 Han Chinese ancestry cases, 1,873 Han Chinese ancestry controls
Replication sample15,979 East Asian ancestry cases, 19,360 East Asian ancestry controls, 794 Malay ancestry cases, 1,240 Malay ancestry controls, 159 Filipino ancestry cases, 1,624 Filipino ancestry controls
Region10q26.11
Chromosome idchr10
Chromosome position119389891
Reported geneGRK5
Mapped geneGRK5
Upstream gene id
Downstream gene id
SNP gene ids2869
Upstream gene distance
Downstream gene distance
SNP risk allelers10886471-C
SNPsrs10886471
Merged0
SNP id current10886471
Contextintron_variant
Intergenic0
Allele frequency0.778
P value0.000000007
Pvalue mlog8.15490195998574
P value text
Or beta1.12
%95 Ci[1.08-1.16]
PlatformIllumina [2234194] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST001666