Human SNP ID | rs10883969 |
---|---|
Human chromosome | chr10 |
Human SNP position | 104124358 |
Pig chromosome | chr14 |
Pig SNP position | 124985101 |
PubMed ID | 23551011 |
---|---|
Journal | Ann Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23551011 |
Study | Genome-wide association study of pre-eclampsia detects novel maternal single nucleotide polymorphisms and copy-number variants in subsets of the Hyperglycemia and Adverse Pregnancy Outcome (HAPO) study cohort. |
Disease/Trait | Preeclampsia |
Initial sample | 21 Afro-Caribbean cases, 1,010 Afro-Caribbean controls, 50 European ancestry cases, 1,202 European ancestry controls, 62 Hispanic cases, 658 Hispanic controls |
Replication sample | NA |
Region | 10q25.1 |
Chromosome id | chr10 |
Chromosome position | 104124358 |
Reported gene | C10orf78 |
Mapped gene | SFR1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 119392 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10883969-? |
SNPs | rs10883969 |
Merged | 0 |
SNP id current | 10883969 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (EA) |
Or beta | 2.97 |
%95 Ci | [1.88-4.69] |
Platform | Illumina [2485249] (imputed) |
CNV | N |
Mapped trait | preeclampsia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000668 |
Study accession | GCST001949 |