SNP Detail For rs10878577
1.Mapping Information
Human SNP ID rs10878577
Human chromosome chr12
Human SNP position 67200061
Pig chromosome chr5
Pig SNP position 34895205
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region12q14.3
Chromosome idchr12
Chromosome position67200061
Reported geneNR
Mapped geneLOC102724421 - CAND1
Upstream gene id102724421
Downstream gene id55832
SNP gene ids
Upstream gene distance103777
Downstream gene distance69220
SNP risk allelers10878577-A
SNPsrs10878577
Merged
SNP id current10878577
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000006
Pvalue mlog6.22184874961635
P value text
Or beta1.06
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048