SNP Detail For rs10875595
1.Mapping Information
Human SNP ID rs10875595
Human chromosome chr5
Human SNP position 141320922
Pig chromosome chr2
Pig SNP position 149151887
2.Annotation Information
PubMed ID22424883
JournalJ Allergy Clin Immunol
Linkwww.ncbi.nlm.nih.gov/pubmed/22424883
StudyGenome-wide association study of lung function decline in adults with and without asthma.
Disease/TraitPulmonary function decline
Initial sample1,441 European ancestry asthma cases, 2,677 European ancestry controls
Replication sample1,160 European ancestry asthma cases, 10,858 European ancestry controls
Region5q31.3
Chromosome idchr5
Chromosome position141320922
Reported geneintergenic
Mapped geneTAF7 - PCDHGA1
Upstream gene id6879
Downstream gene id56114
SNP gene ids
Upstream gene distance138
Downstream gene distance9763
SNP risk allelers10875595-?
SNPsrs10875595
Merged0
SNP id current10875595
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text(FEV1/FVC decline in asthmatics)
Or beta0.2523
%95 Ci[0.15-0.35] unit decrease
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitFEV/FEC ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST001444