Human SNP ID | rs10875595 |
---|---|
Human chromosome | chr5 |
Human SNP position | 141320922 |
Pig chromosome | chr2 |
Pig SNP position | 149151887 |
PubMed ID | 22424883 |
---|---|
Journal | J Allergy Clin Immunol |
Link | www.ncbi.nlm.nih.gov/pubmed/22424883 |
Study | Genome-wide association study of lung function decline in adults with and without asthma. |
Disease/Trait | Pulmonary function decline |
Initial sample | 1,441 European ancestry asthma cases, 2,677 European ancestry controls |
Replication sample | 1,160 European ancestry asthma cases, 10,858 European ancestry controls |
Region | 5q31.3 |
Chromosome id | chr5 |
Chromosome position | 141320922 |
Reported gene | intergenic |
Mapped gene | TAF7 - PCDHGA1 |
Upstream gene id | 6879 |
Downstream gene id | 56114 |
SNP gene ids | |
Upstream gene distance | 138 |
Downstream gene distance | 9763 |
SNP risk allele | rs10875595-? |
SNPs | rs10875595 |
Merged | 0 |
SNP id current | 10875595 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (FEV1/FVC decline in asthmatics) |
Or beta | 0.2523 |
%95 Ci | [0.15-0.35] unit decrease |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | FEV/FEC ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004713 |
Study accession | GCST001444 |