Human SNP ID | rs10874639 |
---|---|
Human chromosome | chr1 |
Human SNP position | 102668353 |
Pig chromosome | chr4 |
Pig SNP position | 127536588 |
PubMed ID | 18464913 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18464913 |
Study | A genome-wide association study identifies protein quantitative trait loci (pQTLs). |
Disease/Trait | Protein quantitative trait loci |
Initial sample | 1,200 European ancestry individuals |
Replication sample | up to 4,590 European ancestry individuals |
Region | 1p21.1 |
Chromosome id | chr1 |
Chromosome position | 102668353 |
Reported gene | COL11A1 |
Mapped gene | LOC105378874 - LOC105378875 |
Upstream gene id | 105378874 |
Downstream gene id | 105378875 |
SNP gene ids | |
Upstream gene distance | 7639 |
Downstream gene distance | 8425 |
SNP risk allele | rs10874639-? |
SNPs | rs10874639 |
Merged | 0 |
SNP id current | 10874639 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.12 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Fibrinogen) |
Or beta | |
%95 Ci | |
Platform | Illumina [496032] |
CNV | N |
Mapped trait | fibrinogen measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004623 |
Study accession | GCST000189 |