SNP Detail For rs10866713
1.Mapping Information
Human SNP ID rs10866713
Human chromosome chr5
Human SNP position 159491886
Pig chromosome chr16
Pig SNP position 69887457
2.Annotation Information
PubMed ID22190364
JournalAnn Neurol
Linkwww.ncbi.nlm.nih.gov/pubmed/22190364
StudyGenome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci.
Disease/TraitMultiple sclerosis
Initial sample5,545 European ancestry cases, 12,153 European ancestry controls
Replication sampleNA
Region5q33.3
Chromosome idchr5
Chromosome position159491886
Reported geneIL12B
Mapped geneLOC285627 - LOC105377686
Upstream gene id285627
Downstream gene id105377686
SNP gene ids
Upstream gene distance25610
Downstream gene distance12896
SNP risk allelers10866713-A
SNPsrs10866713
Merged0
SNP id current10866713
Contextintron_variant
Intergenic1
Allele frequency0.22
P value0.0000007
Pvalue mlog6.15490195998574
P value text
Or beta1.17
%95 Ci[NR]
PlatformAffymetrix, Illumina [2529394]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST001341