Human SNP ID | rs10866713 |
---|---|
Human chromosome | chr5 |
Human SNP position | 159491886 |
Pig chromosome | chr16 |
Pig SNP position | 69887457 |
PubMed ID | 22190364 |
---|---|
Journal | Ann Neurol |
Link | www.ncbi.nlm.nih.gov/pubmed/22190364 |
Study | Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. |
Disease/Trait | Multiple sclerosis |
Initial sample | 5,545 European ancestry cases, 12,153 European ancestry controls |
Replication sample | NA |
Region | 5q33.3 |
Chromosome id | chr5 |
Chromosome position | 159491886 |
Reported gene | IL12B |
Mapped gene | LOC285627 - LOC105377686 |
Upstream gene id | 285627 |
Downstream gene id | 105377686 |
SNP gene ids | |
Upstream gene distance | 25610 |
Downstream gene distance | 12896 |
SNP risk allele | rs10866713-A |
SNPs | rs10866713 |
Merged | 0 |
SNP id current | 10866713 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.22 |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | |
Or beta | 1.17 |
%95 Ci | [NR] |
Platform | Affymetrix, Illumina [2529394] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST001341 |