Human SNP ID | rs10866682 |
---|---|
Human chromosome | chr5 |
Human SNP position | 174609230 |
Pig chromosome | chr16 |
Pig SNP position | 54085629 |
PubMed ID | 26256467 |
---|---|
Journal | Metabolism |
Link | www.ncbi.nlm.nih.gov/pubmed/26256467 |
Study | Genome-wide association study of triglyceride response to a high-fat meal among participants of the NHLBI Genetics of Lipid Lowering Drugs and Diet Network (GOLDN). |
Disease/Trait | Postprandial triglyceride response to high fat diet meal |
Initial sample | 872 European ancestry individuals |
Replication sample | 843 Old Order Amish individuals |
Region | 5q35.2 |
Chromosome id | chr5 |
Chromosome position | 174609230 |
Reported gene | intergenic |
Mapped gene | LOC105377739 - LOC105377740 |
Upstream gene id | 105377739 |
Downstream gene id | 105377740 |
SNP gene ids | |
Upstream gene distance | 61117 |
Downstream gene distance | 6351 |
SNP risk allele | rs10866682-C |
SNPs | rs10866682 |
Merged | |
SNP id current | 10866682 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.1051 |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | (AUI) |
Or beta | 0.4356 |
%95 Ci | [0.27-0.61] unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | response to high fat food intake, triglyceride change measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007684, http://www.ebi.ac.uk/efo/EFO_0007681 |
Study accession | GCST003014 |
PubMed ID | 26256467 |
Journal | Metabolism |
Link | www.ncbi.nlm.nih.gov/pubmed/26256467 |
Study | Genome-wide association study of triglyceride response to a high-fat meal among participants of the NHLBI Genetics of Lipid Lowering Drugs and Diet Network (GOLDN). |
Disease/Trait | Postprandial triglyceride response to high fat diet meal |
Initial sample | 872 European ancestry individuals |
Replication sample | 843 Old Order Amish individuals |
Region | 5q35.2 |
Chromosome id | chr5 |
Chromosome position | 174609230 |
Reported gene | intergenic |
Mapped gene | LOC105377739 - LOC105377740 |
Upstream gene id | 105377739 |
Downstream gene id | 105377740 |
SNP gene ids | |
Upstream gene distance | 61117 |
Downstream gene distance | 6351 |
SNP risk allele | rs10866682-C |
SNPs | rs10866682 |
Merged | |
SNP id current | 10866682 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.1052 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (Uptake slope) |
Or beta | 0.4323 |
%95 Ci | [0.26-0.6] unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | response to high fat food intake, triglyceride change measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007684, http://www.ebi.ac.uk/efo/EFO_0007681 |
Study accession | GCST003014 |