Human SNP ID | rs10864728 |
---|---|
Human chromosome | chr1 |
Human SNP position | 230169168 |
Pig chromosome | chr14 |
Pig SNP position | 64867844 |
PubMed ID | 25961943 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25961943 |
Study | The impact of low-frequency and rare variants on lipid levels. |
Disease/Trait | Triglycerides |
Initial sample | up to 62,166 European ancestry individuals |
Replication sample | NA |
Region | 1q42.13 |
Chromosome id | chr1 |
Chromosome position | 230169168 |
Reported gene | GALNT2 |
Mapped gene | GALNT2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2590 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10864728-A |
SNPs | rs10864728 |
Merged | |
SNP id current | 10864728 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.39 |
P value | 0.0000000000000005 |
Pvalue mlog | 15.3010299956639 |
P value text | |
Or beta | 0.052 |
%95 Ci | [0.04-0.064] s.d. increase |
Platform | Affymetrix, Illumina, Perlegen [up to 9657952] (imputed) |
CNV | N |
Mapped trait | triglyceride measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004530 |
Study accession | GCST002897 |