Human SNP ID | rs10852932 |
---|---|
Human chromosome | chr17 |
Human SNP position | 2240166 |
Pig chromosome | chr12 |
Pig SNP position | 50190445 |
PubMed ID | 19584346 |
---|---|
Journal | JAMA |
Link | www.ncbi.nlm.nih.gov/pubmed/19584346 |
Study | Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data. |
Disease/Trait | Aortic root size |
Initial sample | 12,612 European ancestry individuals |
Replication sample | 4,094 European ancestry individuals |
Region | 17p13.3 |
Chromosome id | chr17 |
Chromosome position | 2240166 |
Reported gene | SMG6, SRR, TSR1, SGSM2 |
Mapped gene | SMG6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23293 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10852932-T |
SNPs | rs10852932 |
Merged | 0 |
SNP id current | 10852932 |
Context | 5_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.36 |
P value | 0.00000000002 |
Pvalue mlog | 10.698970004336 |
P value text | |
Or beta | 0.03 |
%95 Ci | [0.02-0.04] cm increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | aortic root size |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005037 |
Study accession | GCST000442 |