Human SNP ID | rs10838708 |
---|---|
Human chromosome | chr11 |
Human SNP position | 47419962 |
Pig chromosome | chr2 |
Pig SNP position | 16396887 |
PubMed ID | 23563607 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23563607 |
Study | Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture. |
Disease/Trait | Height |
Initial sample | 8,097 European ancestry tall individuals, 8,099 European ancestry short individuals |
Replication sample | 4,872 European ancestry tall individuals, 4,831 European ancestry short individuals |
Region | 11p11.2 |
Chromosome id | chr11 |
Chromosome position | 47419962 |
Reported gene | PSMC3 |
Mapped gene | PSMC3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5702 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10838708-G |
SNPs | rs10838708 |
Merged | 0 |
SNP id current | 10838708 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.53 |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | 1.15 |
%95 Ci | [NR] |
Platform | Affymetrix, Illumina [~ 2800000] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST001956 |