SNP Detail For rs10838708
1.Mapping Information
Human SNP ID rs10838708
Human chromosome chr11
Human SNP position 47419962
Pig chromosome chr2
Pig SNP position 16396887
2.Annotation Information
PubMed ID23563607
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23563607
StudyGenome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture.
Disease/TraitHeight
Initial sample8,097 European ancestry tall individuals, 8,099 European ancestry short individuals
Replication sample4,872 European ancestry tall individuals, 4,831 European ancestry short individuals
Region11p11.2
Chromosome idchr11
Chromosome position47419962
Reported genePSMC3
Mapped genePSMC3
Upstream gene id
Downstream gene id
SNP gene ids5702
Upstream gene distance
Downstream gene distance
SNP risk allelers10838708-G
SNPsrs10838708
Merged0
SNP id current10838708
Contextintron_variant
Intergenic0
Allele frequency0.53
P value0.000000002
Pvalue mlog8.69897000433601
P value text
Or beta1.15
%95 Ci[NR]
PlatformAffymetrix, Illumina [~ 2800000] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001956