SNP Detail For rs10828735
1.Mapping Information
Human SNP ID rs10828735
Human chromosome chr10
Human SNP position 24951155
Pig chromosome chr10
Pig SNP position 55789396
2.Annotation Information
PubMed ID25918132
JournalToxicol Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/25918132
StudyGenome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma.
Disease/TraitDiisocyanate-induced asthma
Initial sample74 European ancestry cases, 824 European ancestry controls
Replication sampleNA
Region10p12.1
Chromosome idchr10
Chromosome position24951155
Reported genePRTFDC1, ARHGAP21, C10orf63
Mapped genePRTFDC1
Upstream gene id
Downstream gene id
SNP gene ids56952
Upstream gene distance
Downstream gene distance
SNP risk allelers10828735-A
SNPsrs10828735
Merged0
SNP id current10828735
Contextintron_variant
Intergenic0
Allele frequency0.007
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta6.76
%95 Ci[2.62-17.44]
PlatformIllumina [1556551]
CNVN
Mapped traitresponse to diisocyanate, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002875