SNP Detail For rs10822013
1.Mapping Information
Human SNP ID rs10822013
Human chromosome chr10
Human SNP position 62492218
Pig chromosome chr14
Pig SNP position 71227088
2.Annotation Information
PubMed ID21908515
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21908515
StudyGenome-wide association study identifies breast cancer risk variant at 10q21.2: results from the Asia Breast Cancer Consortium.
Disease/TraitBreast cancer
Initial sample2,062 East Asian ancestry cases, 2,066 East Asian ancestry controls
Replication sample15,091 East Asian ancestry cases, 14,877 East Asian ancestry controls
Region10q21.2
Chromosome idchr10
Chromosome position62492218
Reported geneZNF365
Mapped geneZNF365
Upstream gene id
Downstream gene id
SNP gene ids22891
Upstream gene distance
Downstream gene distance
SNP risk allelers10822013-T
SNPsrs10822013
Merged0
SNP id current10822013
Contextintron_variant
Intergenic0
Allele frequency0.47
P value0.000000006
Pvalue mlog8.22184874961635
P value text
Or beta1.12
%95 Ci[1.06-1.18]
PlatformAffymetrix [684457]
CNVN
Mapped traitbreast carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000305
Study accessionGCST001224