Human SNP ID | rs10822013 |
---|---|
Human chromosome | chr10 |
Human SNP position | 62492218 |
Pig chromosome | chr14 |
Pig SNP position | 71227088 |
PubMed ID | 21908515 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21908515 |
Study | Genome-wide association study identifies breast cancer risk variant at 10q21.2: results from the Asia Breast Cancer Consortium. |
Disease/Trait | Breast cancer |
Initial sample | 2,062 East Asian ancestry cases, 2,066 East Asian ancestry controls |
Replication sample | 15,091 East Asian ancestry cases, 14,877 East Asian ancestry controls |
Region | 10q21.2 |
Chromosome id | chr10 |
Chromosome position | 62492218 |
Reported gene | ZNF365 |
Mapped gene | ZNF365 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 22891 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10822013-T |
SNPs | rs10822013 |
Merged | 0 |
SNP id current | 10822013 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.47 |
P value | 0.000000006 |
Pvalue mlog | 8.22184874961635 |
P value text | |
Or beta | 1.12 |
%95 Ci | [1.06-1.18] |
Platform | Affymetrix [684457] |
CNV | N |
Mapped trait | breast carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000305 |
Study accession | GCST001224 |