SNP Detail For rs10821905
1.Mapping Information
Human SNP ID rs10821905
Human chromosome chr10
Human SNP position 50886333
Pig chromosome chr14
Pig SNP position 107776982
2.Annotation Information
PubMed ID23263486
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23263486
StudyGenome-wide association analyses identify 18 new loci associated with serum urate concentrations.
Disease/TraitUrate levels
Initial sample49,825 European ancestry males, 60,522 European ancestry females
Replication sampleUp to 32,813 European ancestry individuals
Region10q11.23
Chromosome idchr10
Chromosome position50886333
Reported geneA1CF, ASAH2
Mapped geneA1CF - CCDC58P2
Upstream gene id29974
Downstream gene id100287708
SNP gene ids
Upstream gene distance658
Downstream gene distance76411
SNP risk allelers10821905-A
SNPsrs10821905
Merged0
SNP id current10821905
Contextupstream_gene_variant
Intergenic1
Allele frequency0.18
P value0.00000000000000007
Pvalue mlog16.1549019599857
P value text
Or beta0.057
%95 Ci[0.043-0.071] mg/dl increase
PlatformAffymetrix, Illumina, Perlegen [2450547] (imputed)
CNVN
Mapped traiturate measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531
Study accessionGCST001791