Human SNP ID | rs10821905 |
---|---|
Human chromosome | chr10 |
Human SNP position | 50886333 |
Pig chromosome | chr14 |
Pig SNP position | 107776982 |
PubMed ID | 23263486 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23263486 |
Study | Genome-wide association analyses identify 18 new loci associated with serum urate concentrations. |
Disease/Trait | Urate levels |
Initial sample | 49,825 European ancestry males, 60,522 European ancestry females |
Replication sample | Up to 32,813 European ancestry individuals |
Region | 10q11.23 |
Chromosome id | chr10 |
Chromosome position | 50886333 |
Reported gene | A1CF, ASAH2 |
Mapped gene | A1CF - CCDC58P2 |
Upstream gene id | 29974 |
Downstream gene id | 100287708 |
SNP gene ids | |
Upstream gene distance | 658 |
Downstream gene distance | 76411 |
SNP risk allele | rs10821905-A |
SNPs | rs10821905 |
Merged | 0 |
SNP id current | 10821905 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.18 |
P value | 0.00000000000000007 |
Pvalue mlog | 16.1549019599857 |
P value text | |
Or beta | 0.057 |
%95 Ci | [0.043-0.071] mg/dl increase |
Platform | Affymetrix, Illumina, Perlegen [2450547] (imputed) |
CNV | N |
Mapped trait | urate measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004531 |
Study accession | GCST001791 |