SNP Detail For rs10820447
1.Mapping Information
Human SNP ID rs10820447
Human chromosome chr9
Human SNP position 96369762
Pig chromosome chr10
Pig SNP position 29768069
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine with aura
Initial sample5,118 European ancestry cases, 74,239 European ancestry controls
Replication sampleNA
Region9q22.32
Chromosome idchr9
Chromosome position96369762
Reported geneintergenic
Mapped geneSLC35D2
Upstream gene id
Downstream gene id
SNP gene ids11046
Upstream gene distance
Downstream gene distance
SNP risk allelers10820447-T
SNPsrs10820447
Merged0
SNP id current10820447
Contextintron_variant
Intergenic0
Allele frequency0.16
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.16
%95 Ci[1.09-1.23]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002080