Human SNP ID | rs10814916 |
---|---|
Human chromosome | chr9 |
Human SNP position | 4293150 |
Pig chromosome | chr1 |
Pig SNP position | 243428253 |
PubMed ID | 22961080 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/22961080 |
Study | A genome-wide association study identifies GRK5 and RASGRP1 as type 2 diabetes loci in Chinese Hans. |
Disease/Trait | Type 2 diabetes |
Initial sample | 1,839 Han Chinese ancestry cases, 1,873 Han Chinese ancestry controls |
Replication sample | 15,979 East Asian ancestry cases, 19,360 East Asian ancestry controls, 794 Malay ancestry cases, 1,240 Malay ancestry controls, 159 Filipino ancestry cases, 1,624 Filipino ancestry controls |
Region | 9p24.2 |
Chromosome id | chr9 |
Chromosome position | 4293150 |
Reported gene | GLIS3 |
Mapped gene | GLIS3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 169792 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10814916-C |
SNPs | rs10814916 |
Merged | 0 |
SNP id current | 10814916 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.439 |
P value | 0.000000000006 |
Pvalue mlog | 11.2218487496163 |
P value text | |
Or beta | 1.11 |
%95 Ci | [1.08-1.15] |
Platform | Illumina [2234194] (imputed) |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST001666 |